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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015945544.1_cds_XP_016488014.1_78691
CDS Infomation

[gene=LOC107808048] [db_xref=GeneID:107808048] [protein=laccase-4-like] [protein_id=XP_016488014.1] [location=complement(join(9408..9538,9925..10887,11032..11160,11456..11700,12291..12442,12540..12659))] [gbkey=CDS]
Sequence

ATGGCGTACTCTTTTCTGAAGTGTTATAATCTCTTTTTTCTGACTATATTTGTGTTGGTT
TTAGCAGATACACTAGCACTTGCAAAGCATGGAGGGATTACCAGACACTACAAGTTTAAT
ATTCAAATGCAAAATATGACGAGATTGTGTCAAACAAAGAGCATTGTAACAGTGAATGGC
CAGTTTCCAGGGCCTAGAATTATTGCAAGAGAAGGAGACAGACTTGTTATCAAGGTTGTT
AACCATGTTCAGTACAATGTCACCATTCATTGGCATGGAGTGAGACAACTAAGAAGTGGA
TGGGCAGATGGACCTGCTTATATTACACAATGCCCAATTCAGACAGGGCAGAGTTATGTA
TACAATTTCACAATCACTGGTCAAAGAGGAACTTTATTTTGGCATGCTCACATCTCATGG
CTGAGAGTTACACTCTATGGACCCATTGTTATTCTTCCAAAGAAAGGTGTTGCTTACCCT
TTTCCACAACCCTTCAAGGAAATCCCCATTCTTTTTGGTGAATGGTGGAAGGCAGATACA
GAAACAATTATTAGTAAAGCCCTTCAAACAGGAGGAGCTCCAAATATTTCTGATGCTTAT
ACCATCAATGGTCTTCCTGGACTTTTCTACAATTGCTCTGCTAAAGATACATTCAAATTG
AAGGTGAAACCAGGGAAGACATATCTACTGAGATTAGTCAATGCTGCACTGAATGATGAA
CTTTTCTTCAGCATAGCAAATCACAACCTTACTGTTGTAGAAGTTGATGCGGTTTATGTG
AAACCATTCAAGACCAACACAATTCTTATAACGCCAGGACAAACCACAAATGTCCTCTTG
AAAACCAAACATTTTCATCCTAATGCCACCTTCCTCATGGCGGCTCGGCCTTACGCCACT
GGTCCTGCTGCCTTTGATAATTCCACCACCACTGGAATCTTAGAATATCATCAATCCTCT
AATAACACCAACAAGAGCAGCAAATTTCCTCTGTTAAATCCAAAACTTCCTATATTCAAT
GACACAACTTTTGCTACAAGTTTTGCCAAGAAAATAAGAAGTTTAGCCAATGCAAAATTT
CCAGCCAATGTTCCTAAAAAAGTTGATAAACGGTTTTTCTTCACTGTAGGATTAGGATTG
AATCCATGTCCTAAGAACCAAACATGTCAAGGGCCAAATAACACTAAATTAGCAGCTTCT
GTTAACAATGTATCTTTTGTTCAGCCAAATGTAGCACTTCTTCAATCTCACTTTTTTAAC
CAATCCAAAGGTGTTTATACCACAGATTTTCCAATCAATCCGCCATTTAAATTCAATTAC
ACAGGAAATCCACCAACCAACATTTTTGTTACCACAGGCACAAAAGTTGTGGTGCTACCT
TTTAATACAAGTGTGGAATTAGTTATGCAAGATACAAGTATCATTAGTGCTGAAAGTCAC
CCTCTTCACCTCCATGGTTTTAATTTCTTTGTAGTTGGTCAAGGTTTTGGAAATTATAAT
TCTAGTAAGGACACTGCTAATTTCAACCTTGTTGACCCTGCTGAAAGGAACACTGTTGGT
GTCCCATCCGGAGGTTGGGTCGCTATTCGCTTCCTTGCTGACAACCCAGGAGTATGGTTC
ATGCATTGTCATCTTGAAGTTCACACAAGTTGGGGCTTGAAAATGGCATGGATGGTTATG
GATGGAAAAGGTCCCAAGCAGAAGTTACCTCCTCCACCAGCTGATCTTCCTAAATGTTGA

Peptide Sequence

PEP ID

XP_016488014.1
PEP Infomation

PREDICTED: laccase-4-like [Nicotiana tabacum]
Sequence

MAYSFLKCYNLFFLTIFVLVLADTLALAKHGGITRHYKFNIQMQNMTRLCQTKSIVTVNG
QFPGPRIIAREGDRLVIKVVNHVQYNVTIHWHGVRQLRSGWADGPAYITQCPIQTGQSYV
YNFTITGQRGTLFWHAHISWLRVTLYGPIVILPKKGVAYPFPQPFKEIPILFGEWWKADT
ETIISKALQTGGAPNISDAYTINGLPGLFYNCSAKDTFKLKVKPGKTYLLRLVNAALNDE
LFFSIANHNLTVVEVDAVYVKPFKTNTILITPGQTTNVLLKTKHFHPNATFLMAARPYAT
GPAAFDNSTTTGILEYHQSSNNTNKSSKFPLLNPKLPIFNDTTFATSFAKKIRSLANAKF
PANVPKKVDKRFFFTVGLGLNPCPKNQTCQGPNNTKLAASVNNVSFVQPNVALLQSHFFN
QSKGVYTTDFPINPPFKFNYTGNPPTNIFVTTGTKVVVLPFNTSVELVMQDTSIISAESH
PLHLHGFNFFVVGQGFGNYNSSKDTANFNLVDPAERNTVGVPSGGWVAIRFLADNPGVWF
MHCHLEVHTSWGLKMAWMVMDGKGPKQKLPPPPADLPKC

Transcript Sequence

Gene sequence data has not been registered.